MolNFT v1 · #182691 · protein

Crystal structure of the M. abscessus leurs editing domain in complex with epetraborole-AMP adduct

7N11 · Leucine--tRNA ligase: “Crystal structure of the M. abscessus leurs editing domain in complex with epetraborole-AMP adduct”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.47). MolNFT v1 #182691 on GenesisL1: 3D…

PDB: 7N11
Type: protein
Length: 195 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Leucine--tRNA ligase
EC: 6.1.1.4
UniProt: A0A0U0XQP3
Ligands: SO4
Pockets: 2 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 29% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Leucine--tRNA ligase (EC 6.1.1.4)	protein	195	29% helix, 21% strand	A0A0U0XQP3

Ligands and binding sites

SO4 · Sulfate ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	175	0.47	0.76	30	SO4
2	57	0.29	0.74	17	empty

Compared structures

7N11 · Crystal structure of the M. abscessus LeuRS editing domain in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0U0XQP3
Elsewhere: RCSB PDB 7N11 · PDBe 7N11 · UniProt A0A0U0XQP3

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