MolNFT v1 · #182419 · protein

Tetragonal maltose binding protein

7MQ7 · Maltodextrin-binding protein: “Tetragonal maltose binding protein”. X-ray diffraction, 4 ligands (BGC, GLC, SO4), 3 pockets (best druggability 0.72). MolNFT v1 #182419 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7MQ7
Type: protein
Length: 373 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Maltodextrin-binding protein
UniProt: A0A778V697
Ligands: BGC, GLC, SO4, CL
Pockets: 3 · best druggability 0.72

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Maltodextrin-binding protein	protein	373	46% helix, 21% strand	A0A778V697

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · chains A
GLC · alpha-D-glucopyranose · sugar · chains A
SO4 · Sulfate ion · ion · 3 copies · chains A
CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	350	0.72	0.84	31	BGC, GLC
2	131	0.40	0.74	23	empty
3	51	0.34	0.78	14	empty

Compared structures

7MQ7 · Tetragonal Maltose Binding Protein · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A778V697
Elsewhere: RCSB PDB 7MQ7 · PDBe 7MQ7 · UniProt A0A778V697

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