MolNFT v1 · #182368 · DNA

L-type DNA containing 2'-fluoro-2'-deoxycytidine

7MOO · DNA (5'-D(*(0DG)P*(OFC)P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG)…: “L-type DNA containing 2'-fluoro-2'-deoxycytidine”. X-ray diffraction. MolNFT v1 #182368 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7MOO
Type: DNA
Length: 16 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA (5'-D(*(0DG)P*(OFC)P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG) P*(0DC))-3')

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	DNA (5'-D((0DG)P(OFC)P(0DG)P(0DT)P(0DA)P(0DC)P(0DG) P(0DC))-3')	dna	8	—	—

Interfaces

1 interface between chains.

A–B · 388 Å² buried · 32 hydrogen bonds · nucleic-nucleic

Modifications

Observed in the structure: 16 modified (nucleotide modification).

Compared structures

7MOO · L-type DNA containing 2'-fluoro-2'-deoxycytidine · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 7MOO · PDBe 7MOO

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