MolNFT v1 · #18228 · DNA

Solution structure of DNA containing cpd opposited by ga

1PIB · 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3': “Solution structure of DNA containing cpd opposited by ga”. Solution nmr. MolNFT v1 #18228 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1PIB
Type: DNA
Length: 20 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-D(*CP*GP*CP*AP*TP*TP*AP*CP*GP*C)-3'; 5'-D(*GP*CP*GP*TP*GP*AP*TP*GP*CP*G)-3'

Structure

solution nmr · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	5'-D(CPGPCPAPTPTPAPCPGPC)-3'	dna	10	—	—
B	5'-D(GPCPGPTPGPAPTPGPCPG)-3'	dna	10	—	—

Interfaces

1 interface between chains.

A–B · 485 Å² buried · 53 hydrogen bonds · nucleic-nucleic

Compared structures

1PIB · Solution structure of DNA containing CPD opposited by GA · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1PIB · PDBe 1PIB

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