MolNFT v1 · #182203 · protein + RNA
Miab in the complex with 5'-deoxyadenosine, methionine and RNA
7MJX: “Miab in the complex with 5'-deoxyadenosine, methionine and RNA”. X-ray diffraction, 4 ligands (F3S, SF4, 5AD). MolNFT v1 #182203 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7MJX
- Type
- protein + RNA
- Length
- 911 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A174NUT3
- Ligands
- F3S, SF4, 5AD, NA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 443 | — | A0A174NUT3 |
| B | — | protein | 442 | — | A0A174NUT3 |
| D, M | — | rna | 13 | — | — |
Ligands and binding sites
- F3S · FE3-S4 cluster · ligand · 2 copies · chains A, M, B, D
- SF4 · Iron/sulfur cluster · ligand · 2 copies · chains A, B
- 5AD · 5'-deoxyadenosine · ligand · 2 copies · chains A, M, B, D
- NA · Sodium ion · metal · 3 copies · chains A, B, M
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7MJX · MiaB in the complex with 5'-deoxyadenosine, methionine and RNA · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A174NUT3
- Elsewhere: RCSB PDB 7MJX · PDBe 7MJX · UniProt A0A174NUT3
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