MolNFT v1 · #182008 · protein
Lolcde nucleotide-bound
7MDY: “Lolcde nucleotide-bound”. Electron microscopy, 2 ligands (AOV, MG). MolNFT v1 #182008 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7MDY
- Type
- protein
- Length
- 1,263 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- W8SRF1, C3TDL7, A0A376DIG1
- Ligands
- AOV, MG
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 411 | — | W8SRF1 |
| A | — | protein | 399 | — | C3TDL7 |
| D | — | protein | 227 | — | A0A376DIG1 |
| C | — | protein | 226 | — | A0A376DIG1 |
Ligands and binding sites
- AOV · Adp orthovanadate · ligand · 2 copies · chains D, C, A
- MG · Magnesium ion · metal · 2 copies · chains D, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7MDY · LolCDE nucleotide-bound · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt W8SRF1
- Every structure of UniProt C3TDL7
- Every structure of UniProt A0A376DIG1
- Elsewhere: RCSB PDB 7MDY · PDBe 7MDY · UniProt W8SRF1 · UniProt C3TDL7 · UniProt A0A376DIG1
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