MolNFT v1 · #181877 · protein
Crystal structure of HLA-B*35:01 in complex with ipfamqmay, an 9-mer epitope from SARS-cov-2 spike (S896-904)
7M8U: “Crystal structure of HLA-B*35:01 in complex with ipfamqmay, an 9-mer epitope from SARS-cov-2 spike (S896-904)”. X-ray diffraction, 2 ligands (NA, PO4). MolNFT v1 #181877 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7M8U
- Type
- protein
- Length
- 384 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q546I9, P61769, P0DTC2
- Ligands
- NA, PO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 276 | — | Q546I9 |
| B | — | protein | 99 | — | P61769 |
| C | — | protein | 9 | — | P0DTC2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7M8U · Crystal Structure of HLA-B*35:01 in complex with IPFAMQMAY, an 9-mer epitope from… · the same entry in another collection · chain A against A, TM-score 1.00
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q546I9
- Every structure of UniProt P61769
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7M8U · PDBe 7M8U · UniProt Q546I9 · UniProt P61769 · UniProt P0DTC2
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