MolNFT v1 · #181763 · protein
B6 Fab fragment bound to the SARS-COV/SARS-cov-2 spike stem helix peptide
7M53: “B6 Fab fragment bound to the SARS-COV/SARS-cov-2 spike stem helix peptide”. X-ray diffraction. MolNFT v1 #181763 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7M53
- Type
- protein
- Length
- 448 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 10 | — | P0DTC2 |
| H | — | protein | 220 | — | — |
| L | — | protein | 218 | — | — |
Ligands and binding sites
- GOL · Glycerol · additive · 3 copies · chains H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7M53 · B6 Fab fragment bound to the SARS-CoV/SARS-CoV-2 spike stem helix peptide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7M53 · PDBe 7M53 · UniProt P0DTC2
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