MolNFT v1 · #181707 · protein
Cryo-EM structure of the hcmv pentamer bound by antibodies 1-103, 1-32 and 2-25
7M30: “Cryo-EM structure of the hcmv pentamer bound by antibodies 1-103, 1-32 and 2-25”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #181707 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7M30
- Type
- protein
- Length
- 1,167 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P16832, C8BLJ3, A0A0G2TB82, Q38M21
- Ligands
- NAG
Structure
electron microscopy · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 84 | — | P16832 |
| C | — | protein | 135 | — | C8BLJ3 |
| D | — | protein | 170 | — | A0A0G2TB82 |
| E | — | protein | 108 | — | Q38M21 |
| F | — | protein | 121 | — | — |
| G | — | protein | 108 | — | — |
| H | — | protein | 114 | — | — |
| L | — | protein | 106 | — | — |
| M | — | protein | 119 | — | — |
| N | — | protein | 102 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7M30 · Cryo-EM structure of the HCMV pentamer bound by antibodies 1-103, 1-32 and 2-25 · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16832
- Every structure of UniProt C8BLJ3
- Every structure of UniProt A0A0G2TB82
- Every structure of UniProt Q38M21
- Elsewhere: RCSB PDB 7M30 · PDBe 7M30 · UniProt P16832 · UniProt C8BLJ3 · UniProt A0A0G2TB82 · UniProt Q38M21
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