MolNFT v1 · #181570 · protein + DNA + RNA
Cryo-EM structure of casphi-2 (CAS12J) bound to crrna and phosphorothioate-DNA
7LYT: “Cryo-EM structure of casphi-2 (CAS12J) bound to crrna and phosphorothioate-DNA”. Electron microscopy, 2 ligands (MG, ZN). MolNFT v1 #181570 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LYT
- Type
- protein + DNA + RNA
- Length
- 807 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- MG, ZN
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 712 | — | — |
| B | — | rna | 39 | — | — |
| C | — | dna | 33 | — | — |
| D | — | dna | 23 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LYT · Cryo-EM structure of CasPhi-2 (Cas12j) bound to crRNA and Phosphorothioate-DNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7LYT · PDBe 7LYT
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