MolNFT v1 · #181530 · protein
Cryo-EM structure of conm SOSIP.V7 (conm) in complex with bnab PGT122
7LXM: “Cryo-EM structure of conm SOSIP.V7 (conm) in complex with bnab PGT122”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #181530 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LXM
- Type
- protein
- Length
- 2,373 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E | — | protein | 434 | — | — |
| B, D, F | — | protein | 118 | — | — |
| H, N, P | — | protein | 131 | — | — |
| L, M, O | — | protein | 108 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 93 copies · chains A, L, H, B, C, M, N, D, E, O, P, F
- MAN · alpha-D-mannopyranose · sugar · 48 copies · chains H, A, L, N, C, M, P, E, O
- BMA · beta-D-mannopyranose · sugar · 18 copies · chains H, N, P
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LXM · Cryo-EM structure of ConM SOSIP.v7 (ConM) in complex with bNAb PGT122 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7LXM · PDBe 7LXM
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