MolNFT v1 · #181511 · protein
Cryo-EM structure of edc-crosslinked CONSOSL.UFO.664 (cons-edc) in complex with bnab PGT122
7LX3: “Cryo-EM structure of edc-crosslinked CONSOSL.UFO.664 (cons-edc) in complex with bnab PGT122”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #181511 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LX3
- Type
- protein
- Length
- 2,322 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 534 | — | — |
| L, M, O | — | protein | 109 | — | — |
| H, N, P | — | protein | 131 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 99 copies · chains A, B, H, L, C, N, M, P, O
- MAN · alpha-D-mannopyranose · sugar · 36 copies · chains A, L, H, B, M, N, C, O, P
- BMA · beta-D-mannopyranose · sugar · 9 copies · chains H, N, P
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LX3 · Cryo-EM structure of EDC-crosslinked ConSOSL.UFO.664 (ConS-EDC) in complex with bNAb… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7LX3 · PDBe 7LX3
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