MolNFT v1 · #181121 · DNA

Crystal structure of a four-tetrad, parallel, and K+ stabilized tetrahymena thermophila telomeric G-quadruplex

7LL0 · 26-mer DNA: “Crystal structure of a four-tetrad, parallel, and K+ stabilized tetrahymena thermophila telomeric G-quadruplex”. X-ray diffraction, 1 ligand (K), 2 pockets (best druggability 0.34). MolNFT v1 #181121 on GenesisL1: 3D…

PDB: 7LL0
Type: DNA
Length: 25 nucleotides
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 26-mer DNA
Ligands: K
Pockets: 2 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	26-mer DNA	dna	25	—	—

Ligands and binding sites

K · Potassium ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.34	0.79	10	empty
2	50	0.28	0.76	8	empty

Compared structures

7LL0 · Crystal structure of a four-tetrad, parallel, and K+ stabilized Tetrahymena thermophila… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 7LL0 · PDBe 7LL0

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