MolNFT v1 · #180822 · protein
Crystal structure of epoxyqueuosine reductase queh from thermotoga maritima
7LC5: “Crystal structure of epoxyqueuosine reductase queh from thermotoga maritima”. X-ray diffraction, 3 ligands (SF4, FE, CL), 1 pocket (best druggability 0.68). MolNFT v1 #180822 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7LC5
- Type
- protein
- Length
- 178 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Epoxyqueuosine reductase queh
- EC
- 1.17.99.6
- UniProt
- Q9WZJ0
- Ligands
- SF4, FE, CL
- Pockets
- 1 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 56% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Epoxyqueuosine reductase queh (EC 1.17.99.6) | protein | 178 | 56% helix, 11% strand | Q9WZJ0 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · chains A
- FE · Fe (III) ion · metal · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.68 | 0.88 | 35 | SF4, FE, CL |
Compared structures
- 7LC5 · Crystal structure of epoxyqueuosine reductase QueH from Thermotoga maritima · the same entry in another collection · chain A against A, TM-score 1.00
- Q9WZJ0 · AlphaFold monomer V2.0 prediction for epoxyqueuosine reductase queh (Q9WZJ0) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WZJ0
- Elsewhere: RCSB PDB 7LC5 · PDBe 7LC5 · UniProt Q9WZJ0
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