MolNFT v1 · #18076 · protein
Refined solution structure and ligand-binding properties of pdc-109 domain B. a collagen-binding type II domain
1PDC · Seminal fluid protein pdc-109: “Refined solution structure and ligand-binding properties of pdc-109 domain B. a collagen-binding type II…”. Solution nmr. MolNFT v1 #18076 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1PDC
- Type
- protein
- Length
- 45 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Seminal fluid protein pdc-109
- UniProt
- P02784
Structure
solution nmr · 1 distinct chain · 7% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Seminal fluid protein pdc-109 | protein | 45 | 7% helix, 24% strand | P02784 |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1PDC · Refined solution structure and ligand-binding properties of pdc-109 domain B. a… · the same entry in another collection · chain A against A, TM-score 1.00
- P02784 · AlphaFold monomer V2.0 prediction for seminal plasma protein pdc-109 (P02784) · a predicted model of the same protein · chain A against A, TM-score 0.68
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02784
- Elsewhere: RCSB PDB 1PDC · PDBe 1PDC · UniProt P02784
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