MolNFT v1 · #180729 · protein
Connecting hydrophobic surfaces in cyclic peptides increases membrane permeability
7L9D · Cyclic peptide ala-phe-pro-ile-pro-itz: “Connecting hydrophobic surfaces in cyclic peptides increases membrane permeability”. Solution nmr, 1 ligand (ITZ). MolNFT v1 #180729 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7L9D
- Type
- protein
- Length
- 5 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cyclic peptide ala-phe-pro-ile-pro-itz
- Ligands
- ITZ
Structure
solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyclic peptide ala-phe-pro-ile-pro-itz | protein | 5 | 0% helix, 0% strand | — |
Ligands and binding sites
- ITZ · 2-[(1S,2S)-1-amino-2-methylbutyl]-1,3-thiazole-4-carboxylic acid · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 7L9D · Connecting hydrophobic surfaces in cyclic peptides increases membrane permeability · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7L9D · PDBe 7L9D
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