MolNFT v1 · #180433 · protein
Crystal structure of pseudomonas sp. PDC86 substrate-binding protein aapf in complex with a signaling molecule heheaa
7KZ9: “Crystal structure of pseudomonas sp. PDC86 substrate-binding protein aapf in complex with a signaling…”. X-ray diffraction, 2 ligands (XN7, SO4). MolNFT v1 #180433 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KZ9
- Type
- protein
- Length
- 955 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1H3V8R8
- Ligands
- XN7, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 478 | — | A0A1H3V8R8 |
| B | — | protein | 477 | — | A0A1H3V8R8 |
Ligands and binding sites
- XN7 · N,N~2~-bis(2-hydroxyethyl)glycinamide · ligand · 2 copies · chains A, B
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
- GOL · Glycerol · additive · 8 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KZ9 · Crystal structure of Pseudomonas sp. PDC86 substrate-binding protein Aapf in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1H3V8R8
- Elsewhere: RCSB PDB 7KZ9 · PDBe 7KZ9 · UniProt A0A1H3V8R8
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