MolNFT v1 · #180429 · protein
Crystal structure of kaba from bacillus cereus UW85 in complex with the plp external aldimine adduct with kanosamine-6-phosphate
7KZ5: “Crystal structure of kaba from bacillus cereus UW85 in complex with the plp external aldimine adduct with…”. X-ray diffraction, 2 ligands (O1G, NA). MolNFT v1 #180429 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KZ5
- Type
- protein
- Length
- 1,756 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C0JRF5
- Ligands
- O1G, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 439 | — | C0JRF5 |
Ligands and binding sites
- O1G · 3-deoxy-3-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy) methyl]pyridin-4-yl}methylidene)amino]-6-O-phosphono-alpha-D-gluco pyranose · ligand · 4 copies · chains A, B, C, D
- NA · Sodium ion · metal · 2 copies · chains A, B, C, D
- EDO · 1,2-ethanediol · additive · 51 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KZ5 · Crystal structure of KabA from Bacillus cereus UW85 in complex with the plp external… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0JRF5
- Elsewhere: RCSB PDB 7KZ5 · PDBe 7KZ5 · UniProt C0JRF5
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