MolNFT v1 · #180367 · protein + RNA
Cryo-EM structure of ephydatia fluviatilis piwia-pirna-target complex
7KX9: “Cryo-EM structure of ephydatia fluviatilis piwia-pirna-target complex”. Electron microscopy, 1 ligand (MG). MolNFT v1 #180367 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KX9
- Type
- protein + RNA
- Length
- 774 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D5MRY8
- Ligands
- MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 734 | — | D5MRY8 |
| B | — | rna | 24 | — | — |
| C | — | rna | 16 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KX9 · Cryo-EM structure of Ephydatia fluviatilis PiwiA-piRNA-target complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5MRY8
- Elsewhere: RCSB PDB 7KX9 · PDBe 7KX9 · UniProt D5MRY8
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