MolNFT v1 · #18027 · protein
Fine tuning of the specificity of the periplasmic phosphate transport receptor: site-directed mutagenesis, ligand binding, and crystallographic studies
1PBP · Phosphate-binding protein: “Fine tuning of the specificity of the periplasmic phosphate transport receptor: site-directed mutagenesis…”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.28). MolNFT v1 #18027 on…
- PDB
- 1PBP
- Type
- protein
- Length
- 321 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phosphate-binding protein
- UniProt
- P06128
- Ligands
- PO4
- Pockets
- 1 · best druggability 0.28
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphate-binding protein | protein | 321 | 40% helix, 23% strand | P06128 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.28 | 0.75 | 16 | empty |
Compared structures
- 1PBP · Fine tuning of the specificity of the periplasmic phosphate transport receptor… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06128
- Elsewhere: RCSB PDB 1PBP · PDBe 1PBP · UniProt P06128
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