MolNFT v1 · #179954 · protein + RNA
Crystal structure of bacillus halodurans oapb in complex with its ole RNA target (native, crystal form I)
7KKV: “Crystal structure of bacillus halodurans oapb in complex with its ole RNA target (native, crystal form I)”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #179954 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KKV
- Type
- protein + RNA
- Length
- 149 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9KGD7
- Ligands
- MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 89 | — | Q9KGD7 |
| B | — | rna | 60 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains B
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KKV · Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (native… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KGD7
- Elsewhere: RCSB PDB 7KKV · PDBe 7KKV · UniProt Q9KGD7
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