MolNFT v1 · #179930 · protein
Crystal structure of ligand-free PLEKHA7 pH domain
7KK7 · Pleckstrin homology domain-containing family a member 7: “Crystal structure of ligand-free PLEKHA7 pH domain”. X-ray diffraction, 1 pocket (best druggability 0.57). MolNFT v1 #179930 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7KK7
- Type
- protein
- Length
- 202 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pleckstrin homology domain-containing family a member 7
- UniProt
- Q6IQ23
- Pockets
- 1 · best druggability 0.57
Structure
x-ray diffraction · 2 distinct chains · 15% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pleckstrin homology domain-containing family a member 7 | protein | 103 | 15% helix, 43% strand | Q6IQ23 |
| B | Pleckstrin homology domain-containing family a member 7 | protein | 99 | 15% helix, 43% strand | Q6IQ23 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 296 | 0.57 | 0.77 | 36 | empty |
Interfaces
1 interface between chains.
- A–B · 409 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 7KK7 · crystal structure of ligand-free PLEKHA7 PH domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q6IQ23 · AlphaFold monomer V2.0 prediction for pleckstrin homology domain- containing family a… · a predicted model of the same protein · chain B against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6IQ23
- Elsewhere: RCSB PDB 7KK7 · PDBe 7KK7 · UniProt Q6IQ23
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