MolNFT v1 · #179767 · protein
Ebola virus gp (mucin deleted, makona strain) bound to antibody Fab ebov-437
7KFH: “Ebola virus gp (mucin deleted, makona strain) bound to antibody Fab ebov-437”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #179767 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KFH
- Type
- protein
- Length
- 1,695 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1C4HDV6, A0A0E3XK95
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 229 | — | A0A1C4HDV6 |
| J, K, L | — | protein | 108 | — | — |
| D, E, F | — | protein | 95 | — | A0A0E3XK95 |
| G, H, I | — | protein | 133 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 21 copies · chains A, D, E, B, F, C, G, H, I
- MAN · alpha-D-mannopyranose · sugar · 6 copies · chains E, F, D
- BMA · beta-D-mannopyranose · sugar · 3 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KFH · Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1C4HDV6
- Every structure of UniProt A0A0E3XK95
- Elsewhere: RCSB PDB 7KFH · PDBe 7KFH · UniProt A0A1C4HDV6 · UniProt A0A0E3XK95
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