MolNFT v1 · #179737 · protein
Bdbv-289 bound to ebov gpdmuc makona
7KEJ: “Bdbv-289 bound to ebov gpdmuc makona”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #179737 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KEJ
- Type
- protein
- Length
- 1,740 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1C4HDV6, A0A0E3XK95
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, C, A | — | protein | 235 | — | A0A1C4HDV6 |
| H, I, G | — | protein | 129 | — | — |
| K, L, J | — | protein | 110 | — | — |
| E, F, D | — | protein | 106 | — | A0A0E3XK95 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 15 copies · chains B, E, C, F, A, D
- MAN · alpha-D-mannopyranose · sugar · 6 copies · chains B, F, C, D, E, A
- BMA · beta-D-mannopyranose · sugar · 3 copies
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KEJ · BDBV-289 bound to EBOV GPdMuc Makona · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1C4HDV6
- Every structure of UniProt A0A0E3XK95
- Elsewhere: RCSB PDB 7KEJ · PDBe 7KEJ · UniProt A0A1C4HDV6 · UniProt A0A0E3XK95
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