MolNFT v1 · #17972 · protein
Crystal structure of vibrio cholerae putative NTPase epse
1P9R · General secretion pathway protein E: “Crystal structure of vibrio cholerae putative NTPase epse”. X-ray diffraction, 2 ligands (ZN, CL), 1 pocket (best druggability 0.64). MolNFT v1 #17972 on GenesisL1: 3D structure, binding sites…
- PDB
- 1P9R
- Type
- protein
- Length
- 378 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- General secretion pathway protein E
- UniProt
- P37093
- Ligands
- ZN, CL
- Pockets
- 1 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | General secretion pathway protein E | protein | 378 | 38% helix, 27% strand | P37093 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 416 | 0.64 | 0.78 | 44 | CL |
Modifications
Observed in the structure: 11 modified (engineered).
Compared structures
- 1P9R · Crystal Structure of Vibrio cholerae putative NTPase EpsE · the same entry in another collection · chain A against A, TM-score 1.00
- P37093 · AlphaFold monomer V2.0 prediction for type II secretion system ATPase E (P37093) · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37093
- Elsewhere: RCSB PDB 1P9R · PDBe 1P9R · UniProt P37093
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.