MolNFT v1 · #179610 · protein

Crystal structure of OHYA(E82A) from staphylococcus aureus

7KAX · Oleate hydratase: “Crystal structure of OHYA(E82A) from staphylococcus aureus”. X-ray diffraction, 14 pockets (best druggability 0.87). MolNFT v1 #179610 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7KAX
Type: protein
Length: 1,743 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Oleate hydratase
UniProt: A0A0D6GJV1
Pockets: 14 · best druggability 0.87

Structure

x-ray diffraction · 3 distinct chains · 35% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Oleate hydratase	protein	581	36% helix, 17% strand	A0A0D6GJV1
B	Oleate hydratase	protein	580	33% helix, 17% strand	A0A0D6GJV1
C	Oleate hydratase	protein	582	36% helix, 17% strand	A0A0D6GJV1

Pockets

14 pockets found on a 1 Å grid, 10 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1004	0.87	0.87	118	empty
2	1097	0.85	0.85	114	empty
3	850	0.81	0.83	81	empty
4	84	0.74	0.97	32	empty
5	287	0.70	0.84	34	empty

Interfaces

2 interfaces between chains.

B–C · 2429 Å² buried · 36 hydrogen bonds · protein-protein
A–B · 429 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

7KAX · Crystal structure of OhyA(E82A) from Staphylococcus aureus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0D6GJV1
Elsewhere: RCSB PDB 7KAX · PDBe 7KAX · UniProt A0A0D6GJV1

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