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MolNFT v1 · #179466 · protein

Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 in complex with mes (2-(N-MORPHOLINO)ETHANESULFONIC acid)

7K6F · Transcription initiation factor tfiid subunit 1: “Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 in complex with mes…”. X-ray diffraction, 2 pockets (best druggability 0.49). MolNFT v1 #179466 on GenesisL1: 3D…

PDB
7K6F
Type
protein
Length
252 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Transcription initiation factor tfiid subunit 1
EC
2.3.1.48, 2.7.11.1
UniProt
P21675
Pockets
2 · best druggability 0.49

Structure

x-ray diffraction · 1 distinct chain · 69% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ATranscription initiation factor tfiid subunit 1 (EC 2.3.1.48, 2.7.11.1)protein25269% helix, 0% strandP21675

Ligands and binding sites

  • EDO · 1,2-ethanediol · additive · 3 copies · chains A
  • ACT · Acetate ion · additive · 2 copies · chains A
  • FMT · Formic acid · additive · 2 copies · chains A
  • MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11000.490.8121MES
2690.460.8216ACT

Compared structures

  • 7K6F · Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 in complex with MES… · the same entry in another collection · chain A against A, TM-score 1.00

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