MolNFT v1 · #179416 · protein

Crystal structure of kemp eliminase HG3.17

7K4T · Endo-1,4-beta-xylanase: “Crystal structure of kemp eliminase HG3.17”. X-ray diffraction, 1 pocket (best druggability 0.64). MolNFT v1 #179416 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7K4T
Type: protein
Length: 301 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Endo-1,4-beta-xylanase
EC: 3.2.1.8
UniProt: P23360
Pockets: 1 · best druggability 0.64

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Endo-1,4-beta-xylanase (EC 3.2.1.8)	protein	301	44% helix, 20% strand	P23360

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	198	0.64	0.84	38	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

7K4T · Crystal structure of Kemp Eliminase HG3.17 · the same entry in another collection · chain A against A, TM-score 1.00
P23360 · AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase (P23360) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P23360
Elsewhere: RCSB PDB 7K4T · PDBe 7K4T · UniProt P23360

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.