MolNFT v1 · #179334 · protein
Kelch domain of human KEAP1 bound to NRF2 cyclic peptide, C[GDEEAGE]
7K2G · Kelch-like ech-associated protein 1: “Kelch domain of human KEAP1 bound to NRF2 cyclic peptide, C[GDEEAGE]”. X-ray diffraction, 6 pockets (best druggability 0.73). MolNFT v1 #179334 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7K2G
- Type
- protein
- Length
- 578 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Kelch-like ech-associated protein 1; Gly-asp-glu-glu-ala-gly-glu
- UniProt
- Q14145
- Pockets
- 6 · best druggability 0.73
Structure
x-ray diffraction · 3 distinct chains · 0% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Kelch-like ech-associated protein 1 | protein | 288 | 0% helix, 52% strand | Q14145 |
| B | Kelch-like ech-associated protein 1 | protein | 283 | 0% helix, 54% strand | Q14145 |
| P | Gly-asp-glu-glu-ala-gly-glu | protein | 7 | 0% helix, 0% strand | — |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 491 | 0.73 | 0.82 | 49 | empty |
| 2 | 400 | 0.72 | 0.83 | 38 | empty |
| 3 | 59 | 0.63 | 0.93 | 15 | empty |
| 4 | 77 | 0.51 | 0.84 | 21 | empty |
| 5 | 126 | 0.40 | 0.74 | 24 | empty |
Interfaces
2 interfaces between chains.
- A–B · 573 Ų buried · 8 hydrogen bonds · protein-protein
- B–P · 484 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 7K2G · Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GDEEAGE] · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14145
- Elsewhere: RCSB PDB 7K2G · PDBe 7K2G · UniProt Q14145
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