MolNFT v1 · #179158 · protein

Cellular retinol-binding protein 2 (CRBP2) in complex with 2- palmitoylglycerol

7JX2: “Cellular retinol-binding protein 2 (CRBP2) in complex with 2- palmitoylglycerol”. X-ray diffraction, 1 ligand (VLP), 1 pocket (best druggability 0.84). MolNFT v1 #179158 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7JX2
Type: protein
Length: 135 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Retinol-binding protein 2
UniProt: P50120
Ligands: VLP
Pockets: 1 · best druggability 0.84

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 55% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Retinol-binding protein 2	protein	135	10% helix, 55% strand	P50120

Ligands and binding sites

VLP · 1,3-dihydroxypropan-2-yl hexadecanoate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	257	0.84	0.95	37	VLP

Compared structures

7JX2 · Cellular retinol-binding protein 2 (CRBP2) in complex with 2-palmitoylglycerol · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P50120
Elsewhere: RCSB PDB 7JX2 · PDBe 7JX2 · UniProt P50120

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