MolNFT v1 · #179124 · protein

SARS cov-2 main protease 3CLPRO, room temperature, damage free xfel monoclinic structure

7JVZ · 3C-like proteinase: “SARS cov-2 main protease 3CLPRO, room temperature, damage free xfel monoclinic structure”. X-ray diffraction, 3 pockets (best druggability 0.50). MolNFT v1 #179124 on GenesisL1: 3D structure, binding sites and…

PDB: 7JVZ
Type: protein
Length: 306 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 3C-like proteinase
EC: 3.4.22.69
UniProt: P0DTD1
Pockets: 3 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 25% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	3C-like proteinase (EC 3.4.22.69)	protein	306	25% helix, 26% strand	P0DTD1

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	201	0.50	0.76	28	empty
2	201	0.48	0.75	33	empty
3	50	0.26	0.74	13	empty

Compared structures

7JVZ · SARS CoV-2 MAIN PROTEASE 3CLpro, ROOM TEMPERATURE, DAMAGE FREE XFEL MONOCLINIC STRUCTURE · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DTD1
Elsewhere: RCSB PDB 7JVZ · PDBe 7JVZ · UniProt P0DTD1

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