MolNFT v1 · #178977 · protein
The structure of bame from pseudomonas aeruginosa
7JRK · Outer membrane protein assembly factor bame: “The structure of bame from pseudomonas aeruginosa”. X-ray diffraction, 1 pocket (best druggability 0.31). MolNFT v1 #178977 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JRK
- Type
- protein
- Length
- 176 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein assembly factor bame
- UniProt
- O68562
- Pockets
- 1 · best druggability 0.31
Structure
x-ray diffraction · 1 distinct chain · 18% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Outer membrane protein assembly factor bame | protein | 88 | 18% helix, 34% strand | O68562 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 65 | 0.31 | 0.75 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 3132 Ų buried · 39 hydrogen bonds · protein-protein
Compared structures
- 7JRK · The Structure of BamE from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
- O68562 · AlphaFold monomer V2.0 prediction for outer membrane protein assembly factor bame (O68562) · a predicted model of the same protein · chain B against A, TM-score 0.37
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O68562
- Elsewhere: RCSB PDB 7JRK · PDBe 7JRK · UniProt O68562
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