MolNFT v1 · #178849 · DNA
Self-assembly of a 3D DNA crystal lattice (4X6 scramble duplex version) containing the J34 immobile holliday junction with R3 symmetry
7JNL: “Self-assembly of a 3D DNA crystal lattice (4X6 scramble duplex version) containing the J34 immobile holliday…”. X-ray diffraction, 2 ligands (CAC, MG). MolNFT v1 #178849 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JNL
- Type
- DNA
- Length
- 42 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CAC, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | dna | 21 | — | — |
| C | — | dna | 8 | — | — |
| D | — | dna | 7 | — | — |
| A | — | dna | 6 | — | — |
Ligands and binding sites
- CAC · Cacodylate ion · metal · 2 copies · chains B
- MG · Magnesium ion · metal · 2 copies · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JNL · Self-assembly of a 3D DNA crystal lattice (4x6 scramble duplex version) containing the… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7JNL · PDBe 7JNL
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.