MolNFT v1 · #178785 · protein
Crystal structure of GLVRC01 Fab in complex with anti-idiotype IV1 scfv
7JLK: “Crystal structure of GLVRC01 Fab in complex with anti-idiotype IV1 scfv”. X-ray diffraction, 2 ligands (NA, CL). MolNFT v1 #178785 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JLK
- Type
- protein
- Length
- 670 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NA, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 122 | — | — |
| A | — | protein | 226 | — | — |
| B | — | protein | 210 | — | — |
| L | — | protein | 112 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · 17 copies · chains H, L, A, B
- CL · Chloride ion · ion · 14 copies · chains H, A, B, L
- PEG · Di(hydroxyethyl)ether · additive · 5 copies · chains A, B, H
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7JLK · Crystal structure of glVRC01 Fab in complex with anti-idiotype iv1 scFv · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7JLK · PDBe 7JLK
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