MolNFT v1 · #178784 · protein
Crystal structure of bacillus subtilis upps in complex with clomiphene
7JLJ · Isoprenyl transferase: “Crystal structure of bacillus subtilis upps in complex with clomiphene”. X-ray diffraction, 1 ligand (53Q), 1 pocket (best druggability 0.80). MolNFT v1 #178784 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7JLJ
- Type
- protein
- Length
- 236 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Isoprenyl transferase
- EC
- 2.5.1.-
- UniProt
- A0A063XDJ9
- Ligands
- 53Q
- Pockets
- 1 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Isoprenyl transferase (EC 2.5.1.-) | protein | 236 | 49% helix, 14% strand | A0A063XDJ9 |
Ligands and binding sites
- 53Q · Clomifene · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 353 | 0.80 | 0.89 | 35 | 53Q |
Compared structures
- 7JLJ · Crystal structure of Bacillus subtilis UppS in complex with clomiphene · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A063XDJ9
- Elsewhere: RCSB PDB 7JLJ · PDBe 7JLJ · UniProt A0A063XDJ9
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