MolNFT v1 · #178700 · protein
SCDLH
7JIZ · Dienelactone hydrolase family protein: “SCDLH”. X-ray diffraction, 4 pockets (best druggability 0.60). MolNFT v1 #178700 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7JIZ
- Type
- protein
- Length
- 478 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dienelactone hydrolase family protein
- UniProt
- A0A346MYW6
- Pockets
- 4 · best druggability 0.60
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Dienelactone hydrolase family protein | protein | 239 | 36% helix, 23% strand | A0A346MYW6 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.60 | 0.83 | 20 | empty |
| 2 | 259 | 0.58 | 0.78 | 29 | empty |
| 3 | 232 | 0.52 | 0.76 | 30 | empty |
| 4 | 218 | 0.50 | 0.75 | 25 | empty |
Interfaces
1 interface between chains.
- A–B · 698 Ų buried · 24 hydrogen bonds · protein-protein
Compared structures
- 7JIZ · ScDLH · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A346MYW6
- Elsewhere: RCSB PDB 7JIZ · PDBe 7JIZ · UniProt A0A346MYW6
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