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MolNFT v1 · #178522 · protein

The crystal structure of beta-1,2-mannobiose phosphorylase in complex with mannose 1-phosphate (M1P)

7FIS: “The crystal structure of beta-1,2-mannobiose phosphorylase in complex with mannose 1-phosphate (M1P)”. X-ray diffraction, 2 ligands (M1P, ZN). MolNFT v1 #178522 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7FIS
Type
protein
Length
1,208 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
B0K2C3
Ligands
M1P, ZN

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
C, B, A, D—protein302—B0K2C3

Ligands and binding sites

  • M1P · 1-O-phosphono-alpha-D-mannopyranose · ligand · 5 copies · chains C, B, A, D
  • ZN · Zinc ion · metal · 17 copies · chains C, D, B, A
  • PG4 · Tetraethylene glycol · additive · 2 copies · chains C, B
  • 1PE · Pentaethylene glycol · additive · chains D
  • GOL · Glycerol · additive · chains C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7FIS · The crystal structure of beta-1,2-mannobiose phosphorylase in complex with mannose… · the same entry in another collection · chain D against D, TM-score 1.00
  • B0K2C3 · AlphaFold monomer V2.0 prediction for beta-1,2-mannobiose phosphorylase (B0K2C3) · a predicted model of the same protein · chain D against A, TM-score 0.99

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