MolNFT v1 · #178425 · protein
The crystal structure of a domain-swapped dimeric maltodextrin-binding protein male from salmonella enterica
7FFT: “The crystal structure of a domain-swapped dimeric maltodextrin-binding protein male from salmonella enterica”. X-ray diffraction, 1 ligand (GLC), 3 pockets (best druggability 0.72). MolNFT v1 #178425 on GenesisL1: 3D structure…
- PDB
- 7FFT
- Type
- protein
- Length
- 366 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maltodextrin-binding protein
- UniProt
- A0A0W3SG76
- Ligands
- GLC
- Pockets
- 3 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maltodextrin-binding protein | protein | 366 | 46% helix, 6% strand | A0A0W3SG76 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1075 | 0.72 | 0.75 | 92 | empty |
| 2 | 329 | 0.60 | 0.77 | 37 | empty |
| 3 | 182 | 0.49 | 0.76 | 24 | empty |
Compared structures
- 7FFT · The crystal structure of a domain-swapped dimeric maltodextrin-binding protein MalE from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0W3SG76
- Elsewhere: RCSB PDB 7FFT · PDBe 7FFT · UniProt A0A0W3SG76
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