MolNFT v1 · #178168 · protein

Crystal structure of metal-citrate-binding mutant (S164A) protein (mcta) of ABC transporter in apo state

7F6R · Iron ABC transporter, periplasmic iron-binding protein: “Crystal structure of metal-citrate-binding mutant (S164A) protein (mcta) of ABC transporter in apo state”. X-ray diffraction, 3 ligands (SO3, SO4, CO3), 1 pocket (best…

PDB: 7F6R
Type: protein
Length: 337 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Iron ABC transporter, periplasmic iron-binding protein
UniProt: Q53VZ2
Ligands: SO3, SO4, CO3
Pockets: 1 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Iron ABC transporter, periplasmic iron-binding protein	protein	337	49% helix, 18% strand	Q53VZ2

Ligands and binding sites

SO3 · Sulfite ion · ion · 4 copies · chains A
SO4 · Sulfate ion · ion · chains A
CO3 · Carbonate ion · ion · chains A
GOL · Glycerol · additive · 4 copies · chains A
EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	279	0.57	0.77	38	GOL, SO3, CO3

Compared structures

7F6R · Crystal structure of metal-citrate-binding mutant (S164A) protein (MctA) of ABC… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q53VZ2
Elsewhere: RCSB PDB 7F6R · PDBe 7F6R · UniProt Q53VZ2

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.