MolNFT v1 · #177922 · protein
Crystal structure of escherichia COLI ppnp-selenomethionine derived
7EYK · PYRIMIDINE/PURINE nucleoside phosphorylase: “Crystal structure of escherichia COLI ppnp-selenomethionine derived”. X-ray diffraction, 1 pocket (best druggability 0.47). MolNFT v1 #177922 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7EYK
- Type
- protein
- Length
- 95 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PYRIMIDINE/PURINE nucleoside phosphorylase
- UniProt
- P0C037
- Pockets
- 1 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 63% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PYRIMIDINE/PURINE nucleoside phosphorylase | protein | 95 | 3% helix, 63% strand | P0C037 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 74 | 0.47 | 0.82 | 14 | empty |
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 7EYK · Crystal structure of Escherichia coli ppnP-Selenomethionine derived · the same entry in another collection · chain A against A, TM-score 1.00
- P0C037 · AlphaFold monomer V2.0 prediction for PYRIMIDINE/PURINE nucleoside phosphorylase (P0C037) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C037
- Elsewhere: RCSB PDB 7EYK · PDBe 7EYK · UniProt P0C037
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