MolNFT v1 · #177890 · protein
Crystal structure of ebinur lake virus cap snatching endonuclease in complex with inhibitor 27
7EX8 · Replicase: “Crystal structure of ebinur lake virus cap snatching endonuclease in complex with inhibitor 27”. X-ray diffraction, 3 ligands (I27, MN, CL). MolNFT v1 #177890 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EX8
- Type
- protein
- Length
- 180 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Replicase
- EC
- 2.7.7.48
- UniProt
- A0A059WLS9
- Ligands
- I27, MN, CL
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Replicase (EC 2.7.7.48) | protein | 180 | 53% helix, 13% strand | A0A059WLS9 |
Ligands and binding sites
- I27 · methyl (Z)-4-[1-[(3-chlorophenyl)methyl]-4-[(4-chlorophenyl)methyl]piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoate · ligand · chains A
- MN · Manganese (II) ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EX8 · Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A059WLS9
- Elsewhere: RCSB PDB 7EX8 · PDBe 7EX8 · UniProt A0A059WLS9
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