MolNFT v1 · #177686 · protein
Crystal structure of a transcription factor in complex with ligand
7EQF: “Crystal structure of a transcription factor in complex with ligand”. X-ray diffraction, 1 ligand (JB0). MolNFT v1 #177686 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EQF
- Type
- protein
- Length
- 705 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A4Z1DIH6
- Ligands
- JB0
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 184 | — | A0A4Z1DIH6 |
| B | — | protein | 184 | — | A0A4Z1DIH6 |
| C | — | protein | 167 | — | A0A4Z1DIH6 |
| D | — | protein | 170 | — | A0A4Z1DIH6 |
Ligands and binding sites
- JB0 · (6~{R})-3-methyl-8-[(2~{S},4~{R},5~{S},6~{R})-6-methyl-5-[(2~{S},4~{R},5~{R},6~{R})-6-methyl-4-[(2~{S},5~{S}, 6~{S})-6-methyl-5-[(2~{S},4~{R},5~{S},6~{R})-6-methyl-5-[(2~{S},4~{S},5~{S},6~{R})-6-methyl-4-[(2~{S},5~{S}, 6~{S})-6-methyl-5-oxidanyl-oxan-2-yl]oxy-5-oxidanyl-oxan-2-yl]oxy-4-oxidanyl-oxan-2-yl]oxy-oxan-2-yl]oxy-5-oxidanyl-oxan-2-yl]oxy-4-oxidanyl-oxan-2-yl]oxy-1,6, 11-tris(oxidanyl)-5,6-dihydrobenzo[a]anthracene-7,12-dione · ligand · 3 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EQF · Crystal Structure of a Transcription Factor in complex with Ligand · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4Z1DIH6
- Elsewhere: RCSB PDB 7EQF · PDBe 7EQF · UniProt A0A4Z1DIH6
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