MolNFT v1 · #177295 · DNA
DNA duplex containing C-G-au-C base triple
7EDV · DNA (5'-D(*GP*GP*AP*CP*CP*CP*CP*GP*GP*TP*CP*C)-3'): “DNA duplex containing C-G-au-C base triple”. X-ray diffraction, 1 ligand (AU). MolNFT v1 #177295 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EDV
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*GP*AP*CP*CP*CP*CP*GP*GP*TP*CP*C)-3')
- Ligands
- AU
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*GP*AP*CP*CP*CP*CP*GP*GP*TP*CP*C)-3') | dna | 12 | — | — |
Ligands and binding sites
- AU · Gold ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EDV · DNA duplex containing C-G-Au-C base triple · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7EDV · PDBe 7EDV
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