MolNFT v1 · #177287 · RNA
Crystal structure of the eukaryotic ribosomal decoding site in complex with G418 and HG(II)
7EDM: “Crystal structure of the eukaryotic ribosomal decoding site in complex with G418 and HG(II)”. X-ray diffraction, 2 ligands (GET, HG). MolNFT v1 #177287 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EDM
- Type
- RNA
- Length
- 43 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- GET, HG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 22 | — | — |
| B | — | rna | 21 | — | — |
Ligands and binding sites
- GET · Geneticin · ligand · 2 copies · chains A, B
- HG · Mercury (II) ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EDM · Crystal structure of the eukaryotic ribosomal decoding site in complex with G418 and… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7EDM · PDBe 7EDM
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