MolNFT v1 · #176750 · protein
Crystal structure of a glutathione S-transferase mutant SBGSTU7(T53I) from salix babylonica
7DWF: “Crystal structure of a glutathione S-transferase mutant SBGSTU7(T53I) from salix babylonica”. X-ray diffraction, 8 pockets (best druggability 0.75). MolNFT v1 #176750 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DWF
- Type
- protein
- Length
- 420 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glutathione S-transferase
- UniProt
- A0A4Y5R087
- Pockets
- 8 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 58% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Glutathione S-transferase | protein | 210 | 58% helix, 9% strand | A0A4Y5R087 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 133 | 0.75 | 0.93 | 18 | empty |
| 2 | 370 | 0.67 | 0.80 | 40 | empty |
| 3 | 421 | 0.65 | 0.78 | 43 | empty |
| 4 | 173 | 0.49 | 0.77 | 28 | empty |
| 5 | 64 | 0.40 | 0.80 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 1297 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 7DWF · Crystal structure of a glutathione S-transferase mutant SbGSTU7(T53I) from Salix… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4Y5R087
- Elsewhere: RCSB PDB 7DWF · PDBe 7DWF · UniProt A0A4Y5R087
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