MolNFT v1 · #176719 · protein

PYRI4 in complex with intermolecular diels-alder product

7DVK: “PYRI4 in complex with intermolecular diels-alder product”. X-ray diffraction, 1 ligand (HOF). MolNFT v1 #176719 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7DVK
Type: protein
Length: 652 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: K7QVW7
Ligands: HOF

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	—	protein	163	—	K7QVW7

Ligands and binding sites

HOF · methyl 4-[[(1S,6S)-6-(dimethylcarbamoyl)cyclohex-2-en-1-yl]carbamoyloxymethyl]benzoate · ligand · 4 copies · chains A, B, C, D
GOL · Glycerol · additive · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7DVK · PyrI4 in complex with intermolecular Diels-Alder product · the same entry in another collection · chain A against A, TM-score 1.00
K7QVW7 · AlphaFold monomer V2.0 prediction for spiro-conjugate synthase (K7QVW7) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt K7QVW7
Elsewhere: RCSB PDB 7DVK · PDBe 7DVK · UniProt K7QVW7

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.