MolNFT v1 · #176717 · protein

Crystal structure of abnu: an exo-specific intermolecular diels- alderase

7DVI · AOC_LIKE domain-containing protein: “Crystal structure of abnu: an exo-specific intermolecular diels- alderase”. X-ray diffraction, 1 pocket (best druggability 0.67). MolNFT v1 #176717 on GenesisL1: 3D structure, binding sites and…

PDB: 7DVI
Type: protein
Length: 134 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: AOC_LIKE domain-containing protein
UniProt: A0A1S1R073
Pockets: 1 · best druggability 0.67

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 63% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	AOC_LIKE domain-containing protein	protein	134	4% helix, 63% strand	A0A1S1R073

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 21 copies · chains A
DMS · Dimethyl sulfoxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	254	0.67	0.83	25	EDO, DMS

Compared structures

7DVI · Crystal Structure of AbnU: An exo-specific intermolecular Diels-Alderase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1S1R073
Elsewhere: RCSB PDB 7DVI · PDBe 7DVI · UniProt A0A1S1R073

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