MolNFT v1 · #176523 · protein
Crystal structure of BRD2(BD2)WITH ligand zb-bd-224 bound
7DPO: “Crystal structure of BRD2(BD2)WITH ligand zb-bd-224 bound”. X-ray diffraction, 1 ligand (HFU). MolNFT v1 #176523 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DPO
- Type
- protein
- Length
- 111 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P25440
- Ligands
- HFU
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 111 | — | P25440 |
Ligands and binding sites
- HFU · 5-(1-naphthoyl)-11-methyl-8-((methylsulfonyl)methyl)-4, 5-dihydro-2,3A1,5-triazadibenzo[cd,h]azulen-1(2H)-one · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DPO · Crystal Structure of BRD2(BD2)with Ligand ZB-BD-224 bound · the same entry in another collection · chain A against A, TM-score 1.00
- P25440 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 2 (P25440) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25440
- Elsewhere: RCSB PDB 7DPO · PDBe 7DPO · UniProt P25440
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