MolNFT v1 · #176455 · protein
Photocleavable fluorescent protein in green and red form
7DNA: “Photocleavable fluorescent protein in green and red form”. X-ray diffraction, 2 ligands (CR8, IEY). MolNFT v1 #176455 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DNA
- Type
- protein
- Length
- 1,260 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CR8, IEY
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 213 | — | — |
| D | — | protein | 209 | — | — |
| F | — | protein | 205 | — | — |
| I | — | protein | 208 | — | — |
| K | — | protein | 212 | — | — |
Ligands and binding sites
- CR8 · 2-[1-amino-2-(1H-imidazol-5-yl)ethyl]-1-(carboxymethyl)-4-[(4-oxocyclohexa-2,5-dien-1-ylidene)methyl]-1H-imidazol-5-olate · ligand · 4 copies · chains A, B, D, K
- IEY · {5-hydroxy-4-(4-hydroxybenzyl)-2-[(E)-2-(1H-imidazol-4-yl)ethenyl]-1H-imidazol-1-yl}acetic acid · ligand · 2 copies · chains F, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DNA · Photocleavable Fluorescent Protein in green and red form · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7DNA · PDBe 7DNA
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