MolNFT v1 · #176372 · protein
Hemagglutinin influenza a virus (A/OKUDA/1957(H2N2) bound with a neutralizing antibody
7DKJ: “Hemagglutinin influenza a virus (A/OKUDA/1957(H2N2) bound with a neutralizing antibody”. Electron microscopy, 2 ligands (NAG, BMA). MolNFT v1 #176372 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DKJ
- Type
- protein
- Length
- 2,490 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0A7E4R0
- Ligands
- NAG, BMA
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E, I | — | protein | 498 | — | A0A0A7E4R0 |
| C, G, K | — | protein | 173 | — | — |
| D, H, L | — | protein | 159 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 21 copies · chains A, D, E, H, I, L, C, G, K
- BMA · beta-D-mannopyranose · sugar · 6 copies · chains A, E, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DKJ · Hemagglutinin Influenza A virus (A/Okuda/1957(H2N2) bound with a neutralizing antibody · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0A7E4R0
- Elsewhere: RCSB PDB 7DKJ · PDBe 7DKJ · UniProt A0A0A7E4R0
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